6X7M: LnmK in complex with 2-nitronate-propionyl-oxa(dethia)-CoA

PDB ID: 6X7MDownload
MMDB ID: 188803
PDB Deposition Date: 2020/5/30
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.61  Å
Source Organism:
Similar Structures:
Biological Unit for 6X7M: dimeric; determined by author and by software (PISA)
Molecular Components in 6X7M
Label Count Molecule
Proteins (2 molecules)
2
Bifunctional Methylmalonyl-coa:acp Acyltransferase/decarboxylase
Molecule annotation
Chemicals and Non-standard biopolymers (20 molecules)
1
2
[1-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethoxy]-1-oxidanylidene-propan-2-ylidene]-bis(oxidanidyl)azanium[1-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethoxy]-1-oxidanylidene-propan-2-ylidene]-bis(oxidanidyl)azanium
2
14
SULFATE IONSULFATE ION
3
2
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
4
2
TRIETHYLENE GLYCOLTRIETHYLENE GLYCOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303