6X48: Sortilin-Progranulin Interaction With Compound 17

PDB ID: 6X48Download
MMDB ID: 191196
PDB Deposition Date: 2020/5/22
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 2.9  Å
Source Organism:
Similar Structures:
Biological Unit for 6X48: monomeric; determined by author and by software (PISA)
Molecular Components in 6X48
Label Count Molecule
Protein (1 molecule)
1
Sortilin
(Gene symbol: SORT1)
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
4
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
beta-D-mannopyranosebeta-D-mannopyranose
3
1
alpha-D-mannopyranosealpha-D-mannopyranose
4
1
N-(3,5-dichlorobenzene-1-carbonyl)-5,5-dimethyl-L-norleucineN-(3,5-dichlorobenzene-1-carbonyl)-5,5-dimethyl-L-norleucine
5
1
UNKNOWN LIGANDUNKNOWN LIGAND
6
1
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303