6WOX: Thermus thermophilus RNA polymerase initially transcribing complex with 2'dCTP

PDB ID: 6WOXDownload
MMDB ID: 188794
PDB Deposition Date: 2020/4/26
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 3.14  Å
Source Organism:
Similar Structures:
Biological Unit for 6WOX: nonameric; determined by author and by software (PISA)
Molecular Components in 6WOX
Label Count Molecule
Proteins (6 molecules)
2
DNA-directed RNA Polymerase Subunit Alpha
(Gene symbol: TTHA1664)
Molecule annotation
1
DNA-directed RNA Polymerase Subunit Beta
(Gene symbol: rpoB)
Molecule annotation
1
DNA-directed RNA Polymerase Subunit Beta'
(Gene symbol: TTHA1812)
Molecule annotation
1
DNA-directed RNA Polymerase Subunit Omega
Molecule annotation
1
RNA Polymerase Sigma Factor Siga
Molecule annotation
Nucleotides(3 molecules)
1
DNA (5'-d(p*tp*gp*cp*ap*tp*cp*cp*gp*tp*gp*ap*gp*tp*gp*cp*ap*g)-3')
Molecule annotation
1
DNA (25-mer)
Molecule annotation
1
RNA (5'-r(*gp*cp*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
1
SODIUM IONSODIUM ION
2
1
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
3
1
MAGNESIUM IONMAGNESIUM ION
4
2
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303