6WOD: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with inositol hexakisphosphate and Mg, presoaked with 5-IP7, Mg and Fluoride, soaking 2min in the absence of Fluoride

PDB ID: 6WODDownload
MMDB ID: 199261
PDB Deposition Date: 2020/4/24
Updated in MMDB: 2024/03
Experimental Method:
x-ray diffraction
Resolution: 1.35  Å
Source Organism:
Similar Structures:
Biological Unit for 6WOD: monomeric; determined by author and by software (PISA)
Molecular Components in 6WOD
Label Count Molecule
Protein (1 molecule)
1
Diphosphoinositol Polyphosphate Phosphohydrolase 1
(Gene symbol: NUDT3)
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
1
MAGNESIUM IONMAGNESIUM ION
2
2
CHLORIDE IONCHLORIDE ION
3
1
INOSITOL HEXAKISPHOSPHATEINOSITOL HEXAKISPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303