6WFH: Streptomyces coelicolor methylmalonyl-CoA epimerase substrate complex

PDB ID: 6WFHDownload
MMDB ID: 189871
PDB Deposition Date: 2020/4/3
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.84  Å
Source Organism:
Similar Structures:
Biological Unit for 6WFH: dimeric; determined by author and by software (PISA)
Molecular Components in 6WFH
Label Count Molecule
Proteins (2 molecules)
2
Methylmalonyl-coa Epimerase
(Gene symbol: SCO5398)
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
2
COBALT (II) IONCOBALT (II) ION
2
2
(3S,5R,9R,19E)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9,19-tetrahydroxy-8,8,20-trimethyl-10,14-dioxo-2,4,6-trioxa-18-thia-11,15-diaza-3,5-diphosphahenicos-19-en-21-oic acid 3,5-dioxide (non-preferred name)(3S,5R,9R,19E)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9,19-tetrahydroxy-8,8,20-trimethyl-10,14-dioxo-2,4,6-trioxa-18-thia-11,15-diaza-3,5-diphosphahenicos-19-en-21-oic acid 3,5-dioxide (non-preferred name)
3
2
SULFATE IONSULFATE ION
4
4
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
5
2
CHLORIDE IONCHLORIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303