6WDY: Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with Indole Phenylhydroxamate Inhibitor

PDB ID: 6WDYDownload
MMDB ID: 190428
PDB Deposition Date: 2020/4/1
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.65  Å
Source Organism:
Similar Structures:
Biological Unit for 6WDY: monomeric; determined by author
Molecular Components in 6WDY
Label Count Molecule
Protein (1 molecule)
1
Polyamine Deacetylase Hdac10
(Gene symbol: hdac10)
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
1
N-hydroxy-4-[(1H-indol-1-yl)methyl]benzamideN-hydroxy-4-[(1H-indol-1-yl)methyl]benzamide
2
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
1
ZINC IONZINC ION
4
3
PHOSPHATE IONPHOSPHATE ION
5
2
POTASSIUM IONPOTASSIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303