6WBQ: Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with Tubastatin A

PDB ID: 6WBQDownload
MMDB ID: 190422
PDB Deposition Date: 2020/3/27
Updated in MMDB: 2024/11
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Similar Structures:
Biological Unit for 6WBQ: monomeric; determined by author
Molecular Components in 6WBQ
Label Count Molecule
Protein (1 molecule)
1
Polyamine Deacetylase Hdac10
(Gene symbol: hdac10)
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
1
4-[(2-methyl-3,4-dihydro-1~{H}-pyrido[4,3-b]indol-5-yl)methyl]-~{N}-oxidanyl-benzamide4-[(2-methyl-3,4-dihydro-1~{H}-pyrido[4,3-b]indol-5-yl)methyl]-~{N}-oxidanyl-benzamide
2
5
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
2
POTASSIUM IONPOTASSIUM ION
4
3
PHOSPHATE IONPHOSPHATE ION
5
1
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303