6VPV: Trimeric Photosystem I from the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum

PDB ID: 6VPVDownload
MMDB ID: 205110
PDB Deposition Date: 2020/2/4
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 2.7  Å
Source Organism:
Similar Structures:
Biological Unit for 6VPV: 33-meric; determined by author
Molecular Components in 6VPV
Label Count Molecule
Proteins (33 molecules)
3
Photosystem I P700 Chlorophyll a Apoprotein A1
Molecule annotation
3
Photosystem I P700 Chlorophyll a Apoprotein A2
Molecule annotation
3
Photosystem I Iron-sulfur Center
Molecule annotation
3
Photosystem I Reaction Center Subunit II
Molecule annotation
3
Photosystem I Reaction Center Subunit IV
Molecule annotation
3
Psi-f
Molecule annotation
3
Photosystem I Reaction Center Subunit Viii
Molecule annotation
3
Photosystem I Reaction Center Subunit IX
Molecule annotation
3
Photosystem I Reaction Center Subunit Psak
Molecule annotation
3
Photosystem I Reaction Center Subunit XI
Molecule annotation
3
Photosystem I Reaction Center Subunit XII
Molecule annotation
Chemicals and Non-standard biopolymers (384 molecules)
1
3
CHLOROPHYLL A ISOMERCHLOROPHYLL A ISOMER
2
285
CHLOROPHYLL ACHLOROPHYLL A
3
6
PHYLLOQUINONEPHYLLOQUINONE
4
9
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
5
69
BETA-CAROTENEBETA-CAROTENE
6
6
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
7
3
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
8
3
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303