6VNR: Crystal Structure of Danio rerio Histone Deacetylase 6 Catalytic Domain 2 (CD2) Complexed with Bishydroxamic Acid Inhibitor

PDB ID: 6VNRDownload
MMDB ID: 187591
PDB Deposition Date: 2020/1/29
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.94301  Å
Source Organism:
Similar Structures:
Biological Unit for 6VNR: monomeric; determined by author
Molecular Components in 6VNR
Label Count Molecule
Protein (1 molecule)
1
Hdac6 Protein
(Gene symbol: hdac6)
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
1
ZINC IONZINC ION
2
2
POTASSIUM IONPOTASSIUM ION
3
2
N-hydroxy-1-{[4-(hydroxycarbamoyl)phenyl]methyl}-1H-indole-6-carboxamideN-hydroxy-1-{[4-(hydroxycarbamoyl)phenyl]methyl}-1H-indole-6-carboxamide
4
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303