6VLR: BG505 SOSIP.v5.2 in complex with rhesus macaque Fab RM20E1 and PGT122 Fab

PDB ID: 6VLRDownload
MMDB ID: 189268
PDB Deposition Date: 2020
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 4.42  Å
Source Organism:
Human immunodeficiency virus 1▼
Similar Structures:
Biological Unit for 6VLR: 14-meric; determined by author
Molecular Components in 6VLR
Label Count Molecule
Proteins (14 molecules)
3
Envelope Glycoprotein Gp120
Molecule annotation
3
Bg505 Sosipv5.2 Gp41
Molecule annotation
3
Pgt122 FAB Heavy Chain
Molecule annotation
3
Pgt122 FAB Light Chain
Molecule annotation
1
Rm20e1 FAB Heavy Chain
Molecule annotation
1
Rm20e1 FAB Kappa Chain
Molecule annotation
Chemicals and Non-standard biopolymers (92 molecules)
1
62
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
11
beta-D-mannopyranosebeta-D-mannopyranose
3
19
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303