6VFL: BG505-SOSIP model reconstructed by subparticle extraction and refinement from a tetrahedral nanoparticle T33_dn10

PDB ID: 6VFLDownload
MMDB ID: 190414
PDB Deposition Date: 2020/1/5
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 4.14  Å
Source Organism:
Similar Structures:
Biological Unit for 6VFL: hexameric; determined by author
Molecular Components in 6VFL
Label Count Molecule
Proteins (6 molecules)
3
Bg505-sosipv5.2(7s) - Gp120
Molecule annotation
3
Bg505-sosipv5.2(7s) - Gp41
Molecule annotation
Chemicals and Non-standard biopolymers (102 molecules)
1
93
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
3
beta-D-mannopyranosebeta-D-mannopyranose
3
6
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303