6V79: Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 (CD2) complexed with NF2376

PDB ID: 6V79Download
MMDB ID: 195808
PDB Deposition Date: 2019/12/8
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.03952  Å
Source Organism:
Similar Structures:
Biological Unit for 6V79: monomeric; determined by author
Molecular Components in 6V79
Label Count Molecule
Protein (1 molecule)
1
Hdac6 Protein
(Gene symbol: hdac6)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
1
ZINC IONZINC ION
2
2
POTASSIUM IONPOTASSIUM ION
3
2
4-{[(2S)-3,3-dimethyl-2-(pyridin-3-yl)-2,3-dihydro-1H-indol-1-yl]methyl}-N-hydroxybenzamide4-{[(2S)-3,3-dimethyl-2-(pyridin-3-yl)-2,3-dihydro-1H-indol-1-yl]methyl}-N-hydroxybenzamide
4
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303