6UR9: DNA polymerase I Large Fragment from Bacillus stearothermophilus with DNA template, dideoxy primer, 3'-amino-ddGTP (nGTP), and Ca2+

PDB ID: 6UR9Download
MMDB ID: 185429
PDB Deposition Date: 2019/10/22
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.1  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 6UR9: trimeric; determined by author and by software (PISA)
Molecular Components in 6UR9
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase I
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*gp*cp*gp*ap*tp*cp*ap*gp*(doc))-3')
Molecule annotation
1
DNA (5'-d(*cp*ap*cp*gp*cp*tp*gp*ap*tp*cp*gp*cp*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
1
3'-amino-2',3'-dideoxyguanosine 5'-(tetrahydrogen triphosphate)3'-amino-2',3'-dideoxyguanosine 5'-(tetrahydrogen triphosphate)
2
1
CALCIUM IONCALCIUM ION
3
7
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303