6UH5: Structural basis of COMPASS eCM recognition of the H2Bub nucleosome

PDB ID: 6UH5Download
MMDB ID: 181585
PDB Deposition Date: 2019/9/26
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 3.5  Å
Source Organism:
Kluyveromyces lactis NRRL Y-1140▼
Similar Structures:
Biological Unit for 6UH5: 19-meric; determined by author
Molecular Components in 6UH5
Label Count Molecule
Proteins (17 molecules)
2
Histone H3
Molecule annotation
2
Histone H4
Molecule annotation
2
Histone H2A
Molecule annotation
1
Histone H2B
Molecule annotation
1
Histone H2B
Molecule annotation
1
Swd3
Molecule annotation
1
Histone-lysine N-methyltransferase, H3 Lysine-4 Specific
Molecule annotation
1
Swd1
Molecule annotation
1
Ubiquitin
Molecule annotation
1
H3 N-terminus
Molecule annotation
1
Spp1
Molecule annotation
1
Bre2
Molecule annotation
2
Sdc1
Molecule annotation
Nucleotides(2 molecules)
1
DNA (146-mer)
Molecule annotation
1
DNA (146-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
ZINC IONZINC ION
2
1
S-ADENOSYLMETHIONINES-ADENOSYLMETHIONINE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303