6UDK: HIV-1 bNAb 1-55 in complex with modified BG505 SOSIP-based immunogen RC1 and 10-1074

PDB ID: 6UDKDownload
MMDB ID: 183585
PDB Deposition Date: 2019/9/19
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 3.9  Å
Source Organism:
Human immunodeficiency virus 1▼
Similar Structures:
Biological Unit for 6UDK: octadecameric; determined by author
Molecular Components in 6UDK
Label Count Molecule
Proteins (18 molecules)
3
RC1 Variant of Hiv-1 ENV Glycoprotein Gp120
Molecule annotation
3
10-1074 FAB Heavy Chain
Molecule annotation
3
10-1074 FAB Light Chain
Molecule annotation
3
1-55 FAB Heavy Chain
Molecule annotation
3
1-55 FAB Light Chain
Molecule annotation
3
RC1 Variant of Hiv-1 ENV Glycoprotein Gp41
Molecule annotation
Chemicals and Non-standard biopolymers (88 molecules)
1
57
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
8
beta-D-mannopyranosebeta-D-mannopyranose
3
23
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303