6UDA: Cryo-EM structure of CH235UCA bound to Man5-enriched CH505.N279K.G458Y.SOSIP.664

PDB ID: 6UDADownload
MMDB ID: 180196
PDB Deposition Date: 2019/9/19
Updated in MMDB: 2024/11
Experimental Method:
electron microscopy
Resolution: 4.2  Å
Source Organism:
Human immunodeficiency virus 1▼
Similar Structures:
Biological Unit for 6UDA: dodecameric; determined by author
Molecular Components in 6UDA
Label Count Molecule
Proteins (12 molecules)
3
Ch505.n279k.g458y.sosip.664 Gp120
Molecule annotation
3
Ch235 UCA Heavy Chain FAB
Molecule annotation
3
Ch505.n279k.g458y.sosip.664 Gp41
Molecule annotation
3
Ch235 UCA Light Chain FAB
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
12
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
3
beta-D-mannopyranosebeta-D-mannopyranose
3
3
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303