6TM3: Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylorubrum extorquens AM1 in a close conformation containing NADP+ and methylene-H4MPT

PDB ID: 6TM3Download
MMDB ID: 184675
PDB Deposition Date: 2019/12/3
Updated in MMDB: 2020/05
Experimental Method:
x-ray diffraction
Resolution: 1.08  Å
Source Organism:
Similar Structures:
Biological Unit for 6TM3: trimeric; determined by author and by software (PISA)
Molecular Components in 6TM3
Label Count Molecule
Proteins (3 molecules)
3
Bifunctional Protein Mdta
Molecule annotation
Chemicals and Non-standard biopolymers (57 molecules)
1
3
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATENADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2
3
GLYCEROLGLYCEROL
3
3
5,10-DIMETHYLENE TETRAHYDROMETHANOPTERIN5,10-DIMETHYLENE TETRAHYDROMETHANOPTERIN
4
42
1,2-ETHANEDIOL1,2-ETHANEDIOL
5
6
LITHIUM IONLITHIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303