6TEC: Crystal Structure of full-length Human Lysyl Hydroxylase LH3 - Cocrystal with Fe2+, Mn2+, UDP-Xylose

PDB ID: 6TECDownload
MMDB ID: 201981
PDB Deposition Date: 2019/11/11
Updated in MMDB: 2023/07
Experimental Method:
x-ray diffraction
Resolution: 2.4  Å
Source Organism:
Similar Structures:
Biological Unit for 6TEC: dimeric; determined by author and by software (PISA)
Molecular Components in 6TEC
Label Count Molecule
Proteins (2 molecules)
2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
(Gene symbol: PLOD3)
Molecule annotation
Chemicals and Non-standard biopolymers (22 molecules)
1
4
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
URIDINE-5'-DIPHOSPHATE-XYLOPYRANOSEURIDINE-5'-DIPHOSPHATE-XYLOPYRANOSE
3
2
2-OXOGLUTARIC ACID2-OXOGLUTARIC ACID
4
4
FE (II) IONFE (II) ION
5
2
MANGANESE (II) IONMANGANESE (II) ION
6
8
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303