6T52: Thrombin in Complex with a D-Phe-Pro-imidazole derivative

PDB ID: 6T52Download
MMDB ID: 194597
PDB Deposition Date: 2019/10/15
Updated in MMDB: 2022/12
Experimental Method:
x-ray diffraction
Resolution: 1.45  Å
Source Organism:
Homo sapiens▼
Similar Structures:
Biological Unit for 6T52: trimeric; determined by author
Molecular Components in 6T52
Label Count Molecule
Proteins (3 molecules)
1
Prothrombin
Molecule annotation
1
Prothrombin
Molecule annotation
1
Hirudin Variant-2
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
SODIUM IONSODIUM ION
2
1
PHOSPHATE IONPHOSPHATE ION
3
1
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
4
1
(2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[2-(1~{H}-imidazol-4-yl)ethyl]pyrrolidine-2-carboxamide(2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[2-(1~{H}-imidazol-4-yl)ethyl]pyrrolidine-2-carboxamide
5
1
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303