National Center for
Biotechnology Information

6SK5: Cryo-EM structure of rhinovirus-B5 complexed to antiviral OBR-5-340

PDB ID:	6SK5 Download
MMDB ID:	179215
PDB Deposition Date:	2019/8/14
Updated in MMDB:	2019/09
Experimental Method:	electron microscopy
Resolution:	3.6 Å
Source Organism:	rhinovirus B5
Similar Structures:

Biological Unit for 6SK5: 240-meric; determined by author and by software (UCSF CHIMERA 1.12_b41623.)

Molecular Components in 6SK5
Label	Count	Molecule
Proteins (240 molecules)
D D_1 D_2 D_3 D_4 D_5 D_6 D_7 D_8 D_9 D_10 D_11 D_12 D_13 D_14 D_15 D_16 D_17 D_18 D_19 D_20 D_21 D_22 D_23 D_24 D_25 D_26 D_27 D_28 D_29 …	60	Rhinovirus B5 VP4
B B_1 B_2 B_3 B_4 B_5 B_6 B_7 B_8 B_9 B_10 B_11 B_12 B_13 B_14 B_15 B_16 B_17 B_18 B_19 B_20 B_21 B_22 B_23 B_24 B_25 B_26 B_27 B_28 B_29 …	60	Rhinovirus B5 VP2
A A_1 A_2 A_3 A_4 A_5 A_6 A_7 A_8 A_9 A_10 A_11 A_12 A_13 A_14 A_15 A_16 A_17 A_18 A_19 A_20 A_21 A_22 A_23 A_24 A_25 A_26 A_27 A_28 A_29 …	60	Rhinovirus B5 VP1
C C_1 C_2 C_3 C_4 C_5 C_6 C_7 C_8 C_9 C_10 C_11 C_12 C_13 C_14 C_15 C_16 C_17 C_18 C_19 C_20 C_21 C_22 C_23 C_24 C_25 C_26 C_27 C_28 C_29 …	60	Rhinovirus B5 VP3
Chemicals and Non-standard biopolymers (60 molecules)
1	60	6-phenyl-~{N}3-[4-(trifluoromethyl)phenyl]-1~{H}-pyrazolo[3,4-d]pyrimidine-3,4-diamine

* Click molecule labels to explore molecular sequence information.

Citing MMDB

Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303