6S0S: The crystal structure of kanamycin B dioxygenase (KanJ) from Streptomyces kanamyceticus in complex with nickel, ribostamycin B and 2-oxoglutarate

PDB ID: 6S0SDownload
MMDB ID: 189775
PDB Deposition Date: 2019/6/18
Updated in MMDB: 2020/07
Experimental Method:
x-ray diffraction
Resolution: 2.4  Å
Source Organism:
Similar Structures:
Biological Unit for 6S0S: monomeric; determined by author
Molecular Components in 6S0S
Label Count Molecule
Protein (1 molecule)
1
Kanamycin B Dioxygenase
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
NICKEL (II) IONNICKEL (II) ION
2
1
2-OXOGLUTARIC ACID2-OXOGLUTARIC ACID
3
1
RIBOSTAMYCINRIBOSTAMYCIN
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303