6RYF: High-resolution crystal structure of ERAP1 in complex with 15mer phosphinic peptide

PDB ID: 6RYFDownload
MMDB ID: 182405
PDB Deposition Date: 2019/6/10
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 1.72  Å
Source Organism:
Human immunodeficiency virus 1▼
Similar Structures:
Biological Unit for 6RYF: dimeric; determined by software (PISA)
Molecular Components in 6RYF
Label Count Molecule
Proteins (2 molecules)
1
Endoplasmic Reticulum Aminopeptidase 1
Molecule annotation
1
Pse-arg-ile-gln-arg-ala-phe-val-thr-ile
Molecule annotation
Chemicals and Non-standard biopolymers (34 molecules)
1
6
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
ZINC IONZINC ION
3
1
2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
4
21
1,2-ETHANEDIOL1,2-ETHANEDIOL
5
4
SODIUM IONSODIUM ION
6
1
PROPANOIC ACIDPROPANOIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303