6RPN: Structure of metallo beta lactamase VIM-2 with cyclic boronate APC308

PDB ID: 6RPNDownload
MMDB ID: 185695
PDB Deposition Date: 2019/5/14
Updated in MMDB: 2020/06
Experimental Method:
x-ray diffraction
Resolution: 1.409  Å
Source Organism:
Similar Structures:
Biological Unit for 6RPN: monomeric; determined by author
Molecular Components in 6RPN
Label Count Molecule
Protein (1 molecule)
1
Beta-lactamase Vim-2
(Gene symbol: blaVIM-2)
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
1
(3~{R})-2,2-bis(oxidanyl)-3-(phenylmethylsulfanyl)-3,4-dihydro-1,2-benzoxaborinin-2-ium-8-carboxylic acid(3~{R})-2,2-bis(oxidanyl)-3-(phenylmethylsulfanyl)-3,4-dihydro-1,2-benzoxaborinin-2-ium-8-carboxylic acid
2
1
(3~{S})-2,2-bis(oxidanyl)-3-(phenylmethylsulfanyl)-3,4-dihydro-1,2-benzoxaborinin-2-ium-8-carboxylic acid(3~{S})-2,2-bis(oxidanyl)-3-(phenylmethylsulfanyl)-3,4-dihydro-1,2-benzoxaborinin-2-ium-8-carboxylic acid
3
3
ZINC IONZINC ION
4
2
CHLORIDE IONCHLORIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303