6RKD: Molybdenum storage protein under turnover conditions

PDB ID: 6RKDDownload
MMDB ID: 182397
PDB Deposition Date: 2019/4/30
Updated in MMDB: 2019/12
Experimental Method:
electron microscopy
Resolution: 3.2  Å
Source Organism:
Similar Structures:
Biological Unit for 6RKD: dodecameric; determined by author and by software (PISA)
Molecular Components in 6RKD
Label Count Molecule
Proteins (12 molecules)
6
Molybdenum Storage Protein Subunit Alpha
Molecule annotation
6
Molybdenum Storage Protein Subunit Beta
Molecule annotation
Chemicals and Non-standard biopolymers (90 molecules)
1
12
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
2
6
MAGNESIUM IONMAGNESIUM ION
3
12
bis(mu4-oxo)-tetrakis(mu3-oxo)-hexakis(mu2-oxo)-hexadecaoxo-octamolybdenum (VI)bis(mu4-oxo)-tetrakis(mu3-oxo)-hexakis(mu2-oxo)-hexadecaoxo-octamolybdenum (VI)
4
12
oxidanyl-[[2,2,4,4,4-pentakis($l^{1}-oxidanyl)-1-(oxidanylmolybdenio)-1$l^{3},3-dioxa-2$l^{5},4$l^{5}-dimolybdacyclobut-2-yl]oxy]molybdenumoxidanyl-[[2,2,4,4,4-pentakis($l^{1}-oxidanyl)-1-(oxidanylmolybdenio)-1$l^{3},3-dioxa-2$l^{5},4$l^{5}-dimolybdacyclobut-2-yl]oxy]molybdenum
5
42
MOLYBDATE IONMOLYBDATE ION
6
6
MO(VI)(=O)(OH)2 CLUSTERMO(VI)(=O)(OH)2 CLUSTER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303