6RGE: Crystal structure of NAD kinase 1 from Listeria monocytogenes in complex with an inhibitor

PDB ID: 6RGEDownload
MMDB ID: 187501
PDB Deposition Date: 2019/4/16
Updated in MMDB: 2024/05
Experimental Method:
x-ray diffraction
Resolution: 1.801  Å
Source Organism:
Similar Structures:
Biological Unit for 6RGE: tetrameric; determined by author
Molecular Components in 6RGE
Label Count Molecule
Proteins (4 molecules)
4
NAD Kinase 1
(Gene symbol: ppnK)
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
4
CITRIC ACIDCITRIC ACID
2
4
[(2~{R},3~{R},4~{R},5~{R})-2-[8-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy]prop-1-ynyl]-6-azanyl-purin-9-yl]-5-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl] dihydrogen phosphate[(2~{R},3~{R},4~{R},5~{R})-2-[8-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy]prop-1-ynyl]-6-azanyl-purin-9-yl]-5-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl] dihydrogen phosphate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303