6RAR: Pmar-Lig_PreS3-Mn

PDB ID: 6RARDownload
MMDB ID: 177387
PDB Deposition Date: 2019/4/7
Updated in MMDB: 2019/07
Experimental Method:
x-ray diffraction
Resolution: 1.785  Å
Source Organism:
Prochlorococcus marinus str. MIT 9302▼
Similar Structures:
Biological Unit for 6RAR: tetrameric; determined by author and by software (PISA)
Molecular Components in 6RAR
Label Count Molecule
Protein (1 molecule)
1
Atp-dependent DNA Ligase
Molecule annotation
Nucleotides(3 molecules)
1
DNA (5'-d(*tp*tp*cp*cp*gp*ap*cp*ap*gp*tp*gp*gp*gp*gp*tp*cp*gp*cp*ap*ap*t)-3')
Molecule annotation
1
Dna/rna (5'-d(*ap*tp*tp*gp*cp*gp*ap*c)-r(p*(omc))-d(p*c)-3')
Molecule annotation
1
DNA (5'-d(p*cp*ap*cp*tp*ap*tp*cp*gp*gp*ap*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
MANGANESE (II) IONMANGANESE (II) ION
2
1
ADENOSINE MONOPHOSPHATEADENOSINE MONOPHOSPHATE
3
1
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303