6R1O: Crystal structure of E. coli seryl-tRNA synthetase complexed to a seryl sulfamoyl adenosine derivative

PDB ID: 6R1ODownload
MMDB ID: 183344
PDB Deposition Date: 2019/3/14
Updated in MMDB: 2024/01
Experimental Method:
x-ray diffraction
Resolution: 2.6  Å
Source Organism:
Similar Structures:
Biological Unit for 6R1O: dimeric; determined by author and by software (PISA)
Molecular Components in 6R1O
Label Count Molecule
Proteins (2 molecules)
2
Serine--trna Ligase
Molecule annotation
Chemicals and Non-standard biopolymers (35 molecules)
1
6
[(2~{R},3~{S},4~{R},5~{R})-5-(6-azanyl-2-pyridin-3-yl-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[(2~{S})-2-azanyl-3-oxidanyl-propanoyl]sulfamate[(2~{R},3~{S},4~{R},5~{R})-5-(6-azanyl-2-pyridin-3-yl-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[(2~{S})-2-azanyl-3-oxidanyl-propanoyl]sulfamate
2
4
CHLORIDE IONCHLORIDE ION
3
6
SULFATE IONSULFATE ION
4
8
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
5
10
1,2-ETHANEDIOL1,2-ETHANEDIOL
6
1
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303