6QLV: Crystal structure of W200H UbiX in complex with a geranyl-FMN N5 adduct

PDB ID: 6QLVDownload
MMDB ID: 176370
PDB Deposition Date: 2019/2/1
Updated in MMDB: 2019/08
Experimental Method:
x-ray diffraction
Resolution: 2.391  Å
Source Organism:
Similar Structures:
Biological Unit for 6QLV: dodecameric; determined by software (PISA)
Molecular Components in 6QLV
Label Count Molecule
Proteins (12 molecules)
12
Flavin Prenyltransferase Ubix
Molecule annotation
Chemicals and Non-standard biopolymers (38 molecules)
1
9
[(2~{Z})-3,7-dimethylocta-2,6-dienyl] dihydrogen phosphate[(2~{Z})-3,7-dimethylocta-2,6-dienyl] dihydrogen phosphate
2
9
FLAVIN MONONUCLEOTIDEFLAVIN MONONUCLEOTIDE
3
7
ACETATE IONACETATE ION
4
7
SODIUM IONSODIUM ION
5
3
[(2~{R},3~{S},4~{S})-5-[5-[(2~{Z})-3,7-dimethylocta-2,6-dienyl]-7,8-dimethyl-2,4-bis(oxidanylidene)-1~{H}-benzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate[(2~{R},3~{S},4~{S})-5-[5-[(2~{Z})-3,7-dimethylocta-2,6-dienyl]-7,8-dimethyl-2,4-bis(oxidanylidene)-1~{H}-benzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate
6
3
PHOSPHATE IONPHOSPHATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303