6QCV: Crystal structure of influenza B polymerase initiation state with capped 14-mer RNA primer and CTP

PDB ID: 6QCVDownload
MMDB ID: 176359
PDB Deposition Date: 2018/12/31
Updated in MMDB: 2019/07
Experimental Method:
x-ray diffraction
Resolution: 3.24  Å
Source Organism:
Influenza B virus (B/Memphis/13/2003)▼
Similar Structures:
Biological Unit for 6QCV: hexameric; determined by author and by software (PISA)
Molecular Components in 6QCV
Label Count Molecule
Proteins (3 molecules)
1
Polymerase Acidic Protein
Molecule annotation
1
RNA-directed RNA Polymerase Catalytic Subunit
Molecule annotation
1
Polymerase Basic Protein 2
Molecule annotation
Nucleotides(3 molecules)
1
RNA (5'-d(*(gdm))-r(p*gp*ap*ap*up*gp*cp*up*ap*up*ap*ap*up*ap*g)-3')
Molecule annotation
1
RNA (5'-r(*up*ap*up*ap*cp*cp*up*cp*up*gp*cp*up*up*cp*up*gp*cp*up*ap*up*u)-3')
Molecule annotation
1
RNA (5'-r(p*ap*gp*up*ap*gp*up*ap*ap*cp*ap*ap*gp*ap*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
PHOSPHATE IONPHOSPHATE ION
2
1
CYTIDINE-5'-TRIPHOSPHATECYTIDINE-5'-TRIPHOSPHATE
3
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303