6PXX: Class D beta-lactamase in complex with beta-lactam antibiotic

PDB ID: 6PXXDownload
MMDB ID: 180327
PDB Deposition Date: 2019/7/28
Updated in MMDB: 2019/10
Experimental Method:
x-ray diffraction
Resolution: 1.5  Å
Source Organism:
Similar Structures:
Biological Unit for 6PXX: dimeric; determined by author and by software (PISA)
Molecular Components in 6PXX
Label Count Molecule
Proteins (2 molecules)
2
Beta-lactamase
(Gene symbol: bla)
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
2
(2~{S},3~{R})-3-methyl-2-[(2~{S},3~{R})-3-oxidanyl-1-oxidanylidene-butan-2-yl]-4-[(3~{S},5~{S})-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl]sulfanyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid(2~{S},3~{R})-3-methyl-2-[(2~{S},3~{R})-3-oxidanyl-1-oxidanylidene-butan-2-yl]-4-[(3~{S},5~{S})-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl]sulfanyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid
2
5
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
2
CHLORIDE IONCHLORIDE ION
4
1
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303