6PEL: Crystal structure of bovine opsin with citronellol bound

PDB ID: 6PELDownload
MMDB ID: 189204
PDB Deposition Date: 2019/6/20
Updated in MMDB: 2024/11
Experimental Method:
x-ray diffraction
Resolution: 3.186  Å
Source Organism:
Similar Structures:
Biological Unit for 6PEL: dimeric; determined by author and by software (PISA)
Molecular Components in 6PEL
Label Count Molecule
Proteins (2 molecules)
1
Rhodopsin
(Gene symbol: RHO)
Molecule annotation
1
Ilenlkdvglf G Alpha Peptide CT2
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
2
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
beta-D-mannopyranosebeta-D-mannopyranose
3
1
(3R)-3,7-dimethyloct-6-en-1-ol(3R)-3,7-dimethyloct-6-en-1-ol
4
1
octyl beta-D-glucopyranosideoctyl beta-D-glucopyranoside
5
1
PALMITIC ACIDPALMITIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303