6PBD: DNA N6-Adenine Methyltransferase CcrM In Complex with Double-Stranded DNA Oligonucleotide Containing Its Recognition Sequence GAATC

PDB ID: 6PBDDownload
MMDB ID: 180711
PDB Deposition Date: 2019/6/13
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.343  Å
Source Organism:
Caulobacter vibrioides▼
Similar Structures:
Biological Unit for 6PBD: tetrameric; determined by author and by software (PISA)
Molecular Components in 6PBD
Label Count Molecule
Proteins (2 molecules)
2
Modification Methylase Ccrmi
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*cp*gp*ap*tp*tp*cp*ap*ap*tp*gp*ap*ap*tp*cp*cp*cp*ap*ap*g)-3')
Molecule annotation
1
DNA (5'-d(*gp*cp*tp*tp*gp*gp*gp*ap*tp*tp*cp*ap*tp*tp*gp*ap*ap*tp*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
2
SINEFUNGINSINEFUNGIN
2
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303