6P9C: OXA-48 carbapanemase, doripenem complex

PDB ID: 6P9CDownload
MMDB ID: 178282
PDB Deposition Date: 2019/6/10
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 1.9  Å
Source Organism:
Similar Structures:
Biological Unit for 6P9C: dimeric; determined by author and by software (PISA)
Molecular Components in 6P9C
Label Count Molecule
Proteins (2 molecules)
2
Beta-lactamase
(Gene symbol: bla)
Molecule annotation
Chemicals and Non-standard biopolymers (13 molecules)
1
2
(4R,5S)-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-3-({(3S,5S)-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl}sulfanyl)-4,5-dihydro-1H-pyrrole-2-carboxylic acid(4R,5S)-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-3-({(3S,5S)-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl}sulfanyl)-4,5-dihydro-1H-pyrrole-2-carboxylic acid
2
2
DoripenemDoripenem
3
4
CHLORIDE IONCHLORIDE ION
4
3
CALCIUM IONCALCIUM ION
5
2
CADMIUM IONCADMIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303