6P4F: Crystal structure of the XPB-Bax1-forked DNA ternary complex

PDB ID: 6P4FDownload
MMDB ID: 188940
PDB Deposition Date: 2019/5/27
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 3.55  Å
Source Organism:
Sulfurisphaera tokodaii str. 7▼
Similar Structures:
Biological Unit for 6P4F: tetrameric; determined by author and by software (PISA)
Molecular Components in 6P4F
Label Count Molecule
Proteins (2 molecules)
1
DNA-dependent Atpase Xpbii
Molecule annotation
1
Endonuclease Bax1
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*tp*tp*gp*ap*cp*tp*cp*ap*ap*cp*ap*tp*cp*cp*tp*tp*tp*gp*cp*tp*ap*cp*ap*a)-3')
Molecule annotation
1
DNA (5'-d(p*tp*gp*tp*ap*gp*gp*tp*tp*tp*cp*cp*ap*tp*gp*tp*tp*gp*ap*gp*tp*cp*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
5
MAGNESIUM IONMAGNESIUM ION
2
5
CHLORIDE IONCHLORIDE ION
3
2
PHOSPHATE IONPHOSPHATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303