6P1U: Post-catalytic nicked complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and newly incorporated CMP

PDB ID: 6P1UDownload
MMDB ID: 179131
PDB Deposition Date: 2019/5/20
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 1.75  Å
Source Organism:
Similar Structures:
Biological Unit for 6P1U: tetrameric; determined by author and by software (PISA)
Molecular Components in 6P1U
Label Count Molecule
Protein (1 molecule)
1
DNA-directed Dna/rna Polymerase MU
(Gene symbol: POLM)
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*cp*gp*gp*cp*(8og)p*tp*ap*cp*g)-3')
Molecule annotation
1
DNA (5'-d(p*gp*cp*cp*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (13 molecules)
P
1
DNA/RNA (5'-D(*CP*GP*TP*A)-R(P*C)-3')
1
1
MANGANESE (II) IONMANGANESE (II) ION
2
3
SODIUM IONSODIUM ION
3
4
CHLORIDE IONCHLORIDE ION
4
1
PYROPHOSPHATEPYROPHOSPHATE
5
1
CYTIDINE-5'-TRIPHOSPHATECYTIDINE-5'-TRIPHOSPHATE
6
1
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
7
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303