6P1S: Post-catalytic nicked complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and newly incorporated AMP

PDB ID: 6P1SDownload
MMDB ID: 179129
PDB Deposition Date: 2019/5/20
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 1.75  Å
Source Organism:
Similar Structures:
Biological Unit for 6P1S: tetrameric; determined by author and by software (PISA)
Molecular Components in 6P1S
Label Count Molecule
Protein (1 molecule)
1
DNA-directed Dna/rna Polymerase MU
(Gene symbol: POLM)
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*cp*gp*gp*cp*(8og)p*tp*ap*cp*g)-3')
Molecule annotation
1
DNA (5'-d(p*gp*cp*cp*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
P
1
DNA/RNA (5'-D(*CP*GP*TP*A)-R(P*A)-3')
1
1
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
2
1
MANGANESE (II) IONMANGANESE (II) ION
3
2
SODIUM IONSODIUM ION
4
2
CHLORIDE IONCHLORIDE ION
5
1
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
6
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303