6P08: Ternary structure of the E52D mutant of ANT-4'' with Neomycin, AMP and Pyrophosphate

PDB ID: 6P08Download
MMDB ID: 183504
PDB Deposition Date: 2019/5/16
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.27  Å
Source Organism:
Similar Structures:
Biological Unit for 6P08: dimeric; determined by author and by software (PISA)
Molecular Components in 6P08
Label Count Molecule
Proteins (2 molecules)
2
Kanamycin Nucleotidyltransferase
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
2
NEOMYCINNEOMYCIN
2
2
PYROPHOSPHATEPYROPHOSPHATE
3
4
MAGNESIUM IONMAGNESIUM ION
4
2
ADENOSINE MONOPHOSPHATEADENOSINE MONOPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303