6ORO: Modified BG505 SOSIP-based immunogen RC1 in complex with the elicited V3-glycan patch antibody Ab874NHP

PDB ID: 6ORODownload
MMDB ID: 176165
PDB Deposition Date: 2019/4/30
Updated in MMDB: 2019/12
Experimental Method:
electron microscopy
Resolution: 3.9  Å
Source Organism:
Human immunodeficiency virus 1▼
Similar Structures:
Biological Unit for 6ORO: dodecameric; determined by author
Molecular Components in 6ORO
Label Count Molecule
Proteins (12 molecules)
3
RC1 Variant of Hiv-1 ENV Glycoprotein Gp41
Molecule annotation
3
RC1 Variant of Hiv-1 ENV Glycoprotein Gp120
Molecule annotation
3
Ab874nhp Antibody FAB Heavy Chain
Molecule annotation
3
Ab874nhp Antibody FAB Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (96 molecules)
1
75
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
9
beta-D-mannopyranosebeta-D-mannopyranose
3
12
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303