6OA9: Cdc48-Npl4 complex processing poly-ubiquitinated substrate in the presence of ATP

PDB ID: 6OA9Download
MMDB ID: 177025
PDB Deposition Date: 2019/3/15
Updated in MMDB: 2019/11
Experimental Method:
electron microscopy
Resolution: 3.9  Å
Source Organism:
Similar Structures:
Biological Unit for 6OA9: decameric; determined by author
Molecular Components in 6OA9
Label Count Molecule
Proteins (10 molecules)
6
Cell Division Control Protein 48
(Gene symbol: CDC48)
Molecule annotation
3
Ubiquitin
(Gene symbol: RPL40B)
Molecule annotation
1
Nuclear Protein Localization Protein 4
(Gene symbol: NPL4)
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
9
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
2
1
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
3
2
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303