6O82: S. pombe ubiquitin E1 complex with a ubiquitin-AMP mimic

PDB ID: 6O82Download
MMDB ID: 176589
PDB Deposition Date: 2019/3/8
Updated in MMDB: 2024/11
Experimental Method:
x-ray diffraction
Resolution: 2.604  Å
Source Organism:
Similar Structures:
Biological Unit for 6O82: dimeric; determined by author and by software (PISA)
Molecular Components in 6O82
Label Count Molecule
Proteins (2 molecules)
1
Ubiquitin-activating Enzyme E1 1
Molecule annotation
1
Ubiquitin-60s Ribosomal Protein L40
(Gene symbol: ubi1)
Molecule annotation
Chemicals and Non-standard biopolymers (11 molecules)
1
2
MAGNESIUM IONMAGNESIUM ION
2
2
PYROPHOSPHATE 2-PYROPHOSPHATE 2-
3
5
SULFATE IONSULFATE ION
4
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
5
1
5'-deoxy-5'-(sulfamoylamino)adenosine5'-deoxy-5'-(sulfamoylamino)adenosine
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303