6ND4: Conformational switches control early maturation of the eukaryotic small ribosomal subunit

PDB ID: 6ND4Download
MMDB ID: 176551
PDB Deposition Date: 2018/12/13
Updated in MMDB: 2019/12
Experimental Method:
electron microscopy
Resolution: 4.3  Å
Source Organism:
Similar Structures:
Biological Unit for 6ND4: 30-meric; determined by author
Molecular Components in 6ND4
Label Count Molecule
Proteins (27 molecules)
1
Utp17
Molecule annotation
1
Utp8
Molecule annotation
1
Utp15
(Gene symbol: UTP15)
Molecule annotation
1
Utp9
Molecule annotation
1
Utp5
(Gene symbol: UTP5)
Molecule annotation
1
Utp10
(Gene symbol: UTP10)
Molecule annotation
1
Utp4
Molecule annotation
1
Utp1
(Gene symbol: PWP2)
Molecule annotation
1
Utp6
Molecule annotation
1
Utp12
Molecule annotation
1
Utp13
Molecule annotation
1
Utp18
(Gene symbol: UTP18)
Molecule annotation
1
Utp21
(Gene symbol: UTP21)
Molecule annotation
1
Sof1
(Gene symbol: SOF1)
Molecule annotation
1
Utp7
(Gene symbol: UTP7)
Molecule annotation
1
Imp3
(Gene symbol: IMP3)
Molecule annotation
1
Mpp10
(Gene symbol: MPP10)
Molecule annotation
1
Bud21
(Gene symbol: BUD21)
Molecule annotation
1
Nop56
Molecule annotation
1
Nop58
Molecule annotation
2
Nop1.1
(Gene symbol: NOP1)
Molecule annotation
2
Snu13
(Gene symbol: SNU13)
Molecule annotation
1
Rrp9
(Gene symbol: RRP9)
Molecule annotation
1
Utp24
(Gene symbol: FCF1)
Molecule annotation
1
Unidentified Fragment
Molecule annotation
Nucleotides(3 molecules)
1
5'ets rRNA
Molecule annotation
1
18S rRNA 5' Domain Start
Molecule annotation
1
U3 Snorna
Molecule annotation
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303