6N5C: Crystal structure of the catalytic domain of PPIP5K2 in complex with AMPPNP and 5-PCF2Am-InsP5

PDB ID: 6N5CDownload
MMDB ID: 178656
PDB Deposition Date: 2018/11/21
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 1.95  Å
Source Organism:
Similar Structures:
Biological Unit for 6N5C: monomeric; determined by author and by software (PISA)
Molecular Components in 6N5C
Label Count Molecule
Protein (1 molecule)
1
Inositol Hexakisphosphate and Diphosphoinositol-pentakisphosphate Kinase 2
(Gene symbol: PPIP5K2)
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
1
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2
4
MAGNESIUM IONMAGNESIUM ION
3
1
(1,1-difluoro-2-oxo-2-{[(1s,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl]amino}ethyl)phosphonic acid(1,1-difluoro-2-oxo-2-{[(1s,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl]amino}ethyl)phosphonic acid
4
3
ACETATE IONACETATE ION
5
5
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303