6M5J: U shaped head to head four-way junction in d(TTCTGCTGCTGAA/TTCTGCAGCTGAA) sequence

PDB ID: 6M5JDownload
MMDB ID: 189999
PDB Deposition Date: 2020/3/11
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.65  Å
Source Organism:
Biological Unit for 6M5J: tetrameric; determined by author and by software (PISA)
Molecular Components in 6M5J
Label Count Molecule
Nucleotides(4 molecules)
3
DNA (5'-d(p*tp*tp*cp*tp*gp*cp*tp*gp*cp*tp*gp*ap*a)-3')
Molecule annotation
1
DNA (5'-d(p*tp*tp*cp*tp*gp*cp*ap*gp*cp*tp*gp*ap*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
4
COBALT (II) IONCOBALT (II) ION
2
4
N4-[4-[(6-chloranyl-2-methoxy-acridin-9-yl)amino]butyl]-1,3,5-triazine-2,4,6-triamineN4-[4-[(6-chloranyl-2-methoxy-acridin-9-yl)amino]butyl]-1,3,5-triazine-2,4,6-triamine
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303