6M0R: 2.7A Yeast Vo state3

PDB ID: 6M0RDownload
MMDB ID: 195228
PDB Deposition Date: 2020/2/22
Updated in MMDB: 2020/12
Experimental Method:
electron microscopy
Resolution: 2.7  Å
Source Organism:
Similar Structures:
Biological Unit for 6M0R: 15-meric; determined by author
Molecular Components in 6M0R
Label Count Molecule
Proteins (15 molecules)
1
V-type Proton Atpase Subunit C'
(Gene symbol: VMA11)
Molecule annotation
1
V-type Proton Atpase Subunit C''
(Gene symbol: VMA16)
Molecule annotation
1
V0 Assembly Protein 1
(Gene symbol: VOA1)
Molecule annotation
1
V-type Proton Atpase Subunit E
(Gene symbol: VMA9)
Molecule annotation
8
V-type Proton Atpase Subunit C
(Gene symbol: VMA3)
Molecule annotation
1
Uncharacterized Protein Ypr170w-b
(Gene symbol: YPR170W-B)
Molecule annotation
1
V-type Proton Atpase Subunit D
(Gene symbol: VMA6)
Molecule annotation
1
V-type Proton Atpase Subunit A, Vacuolar Isoform
(Gene symbol: VPH1)
Molecule annotation
Chemicals and Non-standard biopolymers (37 molecules)
1
2
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
beta-D-mannopyranosebeta-D-mannopyranose
3
2
alpha-D-mannopyranosealpha-D-mannopyranose
4
30
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine1,2-dioleoyl-sn-glycero-3-phosphoethanolamine
5
1
PYROPHOSPHATEPYROPHOSPHATE
6
1
(6~{E},10~{E},14~{E},18~{E},22~{E},26~{E},30~{R})-2,6,10,14,18,22,26,30-octamethyldotriaconta-2,6,10,14,18,22,26-heptaene(6~{E},10~{E},14~{E},18~{E},22~{E},26~{E},30~{R})-2,6,10,14,18,22,26,30-octamethyldotriaconta-2,6,10,14,18,22,26-heptaene
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303