6LCP: Cryo-EM structure of Dnf1 from Chaetomium thermophilum in the E2P state

PDB ID: 6LCPDownload
MMDB ID: 186938
PDB Deposition Date: 2019/11/19
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 3.48  Å
Source Organism:
Similar Structures:
Biological Unit for 6LCP: dimeric; determined by author
Molecular Components in 6LCP
Label Count Molecule
Proteins (2 molecules)
1
Phospholipid-transporting Atpase
(Gene symbol: CTHT_0012810)
Molecule annotation
1
Cdc50
(Gene symbol: CTHT_0052360)
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
3
alpha-D-mannopyranosealpha-D-mannopyranose
2
8
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
3
2
beta-D-mannopyranosebeta-D-mannopyranose
4
1
MAGNESIUM IONMAGNESIUM ION
5
1
BERYLLIUM TRIFLUORIDE IONBERYLLIUM TRIFLUORIDE ION
6
2
(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate
7
1
O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serineO-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303