National Center for
Biotechnology Information

6KNB: PolD-PCNA-DNA (form A)

PDB ID:

MMDB ID:

190769

PDB Deposition Date:

2019/8/5

Updated in MMDB:

2020/08

Experimental Method:

electron microscopy

Resolution:

6.9 Å

Source Organism:

Thermococcus kodakarensis▼

Taxonomy	Molecule
Thermococcus kodakarensis	B
Thermococcus kodakarensis KOD1	A, C, D, E
synthetic construct	F, G

Similar Structures:

Biological Unit for 6KNB: heptameric; determined by author

Molecular Components in 6KNB
Label	Count	Molecule
Proteins (5 molecules)
A	1	DNA Polymerase II Small Subunit
B	1	DNA Polymerase D DP2 (Dna Polymerase II Large) Subunit
C D E	3	DNA Polymerase Sliding Clamp 1
Nucleotides(2 molecules)
F	1	Pri25dna
G	1	Temp35dna
Chemicals and Non-standard biopolymers (5 molecules)
1	1	FE (III) ION
2	4	ZINC ION

* Click molecule labels to explore molecular sequence information.

Citing MMDB