6KHJ: Supercomplex for electron transfer

PDB ID: 6KHJDownload
MMDB ID: 184047
PDB Deposition Date: 2019/7/15
Updated in MMDB: 2025/07
Experimental Method:
electron microscopy
Resolution: 3  Å
Source Organism:
Similar Structures:
Biological Unit for 6KHJ: octadecameric; determined by author
Molecular Components in 6KHJ
Label Count Molecule
Proteins (18 molecules)
1
Nad(p)h-quinone Oxidoreductase Subunit 1
(Gene symbol: ndhA)
Molecule annotation
1
Nad(p)h-quinone Oxidoreductase Subunit 2
(Gene symbol: ndhB)
Molecule annotation
1
Nad(p)h-quinone Oxidoreductase Subunit 3
(Gene symbol: ndhC)
Molecule annotation
1
Nad(p)h-quinone Oxidoreductase Chain 4 1
(Gene symbol: ndhD1)
Molecule annotation
1
Nad(p)h-quinone Oxidoreductase Subunit 4L
Molecule annotation
1
Nadh Dehydrogenase Subunit 5
Molecule annotation
1
Nadh-quinone Oxidoreductase Subunit J
Molecule annotation
1
Nad(p)h-quinone Oxidoreductase Subunit H
(Gene symbol: ndhH)
Molecule annotation
1
Nad(p)h-quinone Oxidoreductase Subunit I
(Gene symbol: ndhI)
Molecule annotation
1
Nad(p)h-quinone Oxidoreductase Subunit J
(Gene symbol: ndhJ)
Molecule annotation
1
Nad(p)h-quinone Oxidoreductase Subunit K
(Gene symbol: ndhK)
Molecule annotation
1
Nad(p)h-quinone Oxidoreductase Subunit L
(Gene symbol: ndhL)
Molecule annotation
1
Nad(p)h-quinone Oxidoreductase Subunit M
(Gene symbol: tll0447)
Molecule annotation
1
Nad(p)h-quinone Oxidoreductase Subunit N
(Gene symbol: tlr1130)
Molecule annotation
1
Nad(p)h-quinone Oxidoreductase Subunit O
(Gene symbol: tsl0017)
Molecule annotation
1
Proton-translocating Nadh-quinone Dehydrogenase Subunit P
Molecule annotation
1
Proton-translocating Nadh-quinone Dehydrogenase Subunit Q
Molecule annotation
1
Tlr0636 Protein
Molecule annotation
Chemicals and Non-standard biopolymers (20 molecules)
1
2
DIGALACTOSYL DIACYL GLYCEROL (DGDG)DIGALACTOSYL DIACYL GLYCEROL (DGDG)
2
1
2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE
3
3
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
4
6
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
5
2
BETA-CAROTENEBETA-CAROTENE
6
1
DODECYL-BETA-D-MALTOSIDEDODECYL-BETA-D-MALTOSIDE
7
2
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
8
3
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303