6KF3: Cryo-EM structure of Thermococcus kodakarensis RNA polymerase

PDB ID: 6KF3Download
MMDB ID: 189398
PDB Deposition Date: 2019/7/6
Updated in MMDB: 2020/07
Experimental Method:
electron microscopy
Resolution: 3.9  Å
Source Organism:
Similar Structures:
Biological Unit for 6KF3: undecameric; determined by author
Molecular Components in 6KF3
Label Count Molecule
Proteins (11 molecules)
1
DNA-directed RNA Polymerase Subunit
Molecule annotation
1
DNA-directed RNA Polymerase Subunit Beta
Molecule annotation
1
DNA-directed RNA Polymerase Subunit A''
(Gene symbol: rpoA2)
Molecule annotation
1
DNA-directed RNA Polymerase Subunit D
Molecule annotation
1
DNA-directed RNA Polymerase, Subunit E
Molecule annotation
1
DNA-directed RNA Polymerase, Subunit F
Molecule annotation
1
DNA-directed RNA Polymerase Subunit H
(Gene symbol: TK_RS05325)
Molecule annotation
1
DNA-directed RNA Polymerase Subunit K
(Gene symbol: TK_RS07470)
Molecule annotation
1
DNA-directed RNA Polymerase Subunit L
(Gene symbol: TK_RS05745)
Molecule annotation
1
DNA-directed RNA Polymerase Subunit N
(Gene symbol: TK_RS07480)
Molecule annotation
1
DNA-directed RNA Polymerase Subunit P
(Gene symbol: TK_RS03045)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
1
MAGNESIUM IONMAGNESIUM ION
2
5
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303