6KDU: Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis

PDB ID: 6KDUDownload
MMDB ID: 189396
PDB Deposition Date: 2019/7/2
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 6KDU: monomeric; determined by author and by software (PISA)
Molecular Components in 6KDU
Label Count Molecule
Protein (1 molecule)
1
DNA Ligase a
(Gene symbol: ligA)
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
1
ADENOSINE MONOPHOSPHATEADENOSINE MONOPHOSPHATE
2
1
BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATEBETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE
3
3
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303