6KDM: HIV-1 reverse transcriptase with Q151M/Y115F/F116Y:DNA:entecavir 5'-triphosphate ternary complex

PDB ID: 6KDMDownload
MMDB ID: 184777
PDB Deposition Date: 2019/7/2
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 2.32  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 6KDM: trimeric; determined by author and by software (PISA)
Molecular Components in 6KDM
Label Count Molecule
Proteins (2 molecules)
1
Hiv-1 Reverse Transcriptase P66 Subunit
Molecule annotation
1
Hiv-1 RT P51 Subunit
Molecule annotation
Nucleotide(1 molecule)
1
Dna/rna (38-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
3
GLYCEROLGLYCEROL
2
1
MAGNESIUM IONMAGNESIUM ION
3
1
[[(1R,3S,5S)-3-(2-azanyl-6-oxidanylidene-3H-purin-9-yl)-2-methylidene-5-oxidanyl-cyclopentyl]methoxy-oxidanyl-phosphory l] phosphono hydrogen phosphate[[(1R,3S,5S)-3-(2-azanyl-6-oxidanylidene-3H-purin-9-yl)-2-methylidene-5-oxidanyl-cyclopentyl]methoxy-oxidanyl-phosphory l] phosphono hydrogen phosphate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303